BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004G03SP1|AL425281
(930 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1453 1828 0.0
>3x_Contig1453
Length = 8444
Score = 1828 bits (920), Expect = 0.0
Identities = 922/924 (99%)
Strand = Plus / Minus
Query: 5 gatcataagatattccatcaacctttttgctatatgaacttgttttgccaaaagccgaac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3056 gatcataagatattccatcaacctttttgctatatgaacttgttttgccaaaagccgaac 2997
Query: 65 gtatcctcttagtcaaacattctgcataaatcgatactgataaaatccatatagctaaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2996 gtatcctcttagtcaaacattctgcataaatcgatactgataaaatccatatagctaaga 2937
Query: 125 tgataacaattatcacgaagtagatagtgaaatattcgtagatatgtcctcgaataattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2936 tgataacaattatcacgaagtagatagtgaaatattcgtagatatgtcctcgaataattt 2877
Query: 185 cctttaatgagacttccgttacacgcttgttaagagcaaacatatagttgaaataaccaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2876 cctttaatgagacttccgttacacgcttgttaagagcaaacatatagttgaaataaccaa 2817
Query: 245 gcccatacttttcaatgggtttgtagccaccatcgtctgtgaaagtttttatatctagca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2816 gcccatacttttcaatgggtttgtagccaccatcgtctgtgaaagtttttatatctagca 2757
Query: 305 cgatttgtgagttgccggtgtcagcataagcatgctctcgcagtaaagcggcatcgactg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2756 cgatttgtgagttgccggtgtcagcataagcatgctctcgcagtaaagcggcatcgactg 2697
Query: 365 gtggggggagcattgtatatcgttgaaactaaaatcctttggaaacaaaattagtctatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2696 gtggggggagcattgtatatcgttgaaactaaaatcctttggaaacaaaattagtctatc 2637
Query: 425 caaatctccgttagtcttaagtaaaagtgttatctagtgaacagcggaaaatcttgacca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2636 caaatctccgttagtcttaagtaaaagtgttatctagtgaacagcggaaaatcttgacca 2577
Query: 485 gttttggttcagtgtaaaaaaaataagttgaatatcttgtgcatctttcaagcttctcaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2576 gttttggttcagtgtaaaaaaaataagttgaatatcttgtgcatctttcaagcttctcaa 2517
Query: 545 tgattgtgtaaattgtttgttttcatccaaaattcatgttgataatattgacggccaaaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2516 tgattgtgtaaattgtttgttttcatccaaaattcatgttgataatattgacggccaaaa 2457
Query: 605 tagtaatcatgaaaataattctgaaaaactatcaacgaaaggtgtcagcgaacgataaga 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2456 tagtaatcatgaaaataattctgaaaaactatcaacgaaaggtgtcagcgaacgataaga 2397
Query: 665 ataagtcacgtgcgcaagttttacaattgtaatctatttagacgtgagtdtgtattgtcg 724
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2396 ataagtcacgtgcgcaagttttacaattgtaatctatttagacgtgagtatgtattgtcg 2337
Query: 725 ttagatgagatttcgaggtaggatgttcttcaaggtaaattcttcagacaccggttcatc 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2336 ttagatgagatttcgaggtaggatgttcttcaaggtaaattcttcagacaccggttcatc 2277
Query: 785 caatatggcaaggtctttgtctgggaagattttggggaaaaamaatgataaaatgacggt 844
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2276 caatatggcaaggtctttgtctgggaagattttggggaaaaacaatgataaaatgacggt 2217
Query: 845 gagtaacaacacgataggaaaaccaatcgcaccttttgtgtttgttattgcgaattcagc 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2216 gagtaacaacacgataggaaaaccaatcgcaccttttgtgtttgttattgcgaattcagc 2157
Query: 905 aacgaatccaactaaactgagtga 928
||||||||||||||||||||||||
Sbjct: 2156 aacgaatccaactaaactgagtga 2133
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7650
Number of Sequences: 1807
Number of extensions: 7650
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 930
length of database: 10,358,551
effective HSP length: 16
effective length of query: 914
effective length of database: 10,329,639
effective search space: 9441290046
effective search space used: 9441290046
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)